CDS

Accession Number TCMCG057C57195
gbkey CDS
Protein Id XP_018463360.1
Location complement(join(6827..6949,7022..7300,7389..7664,7730..7948,8056..8224,8435..8609,9259..9370,9511..>9722))
Gene LOC108834520
GeneID 108834520
Organism Raphanus sativus

Protein

Length 539aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018607858.1
Definition PREDICTED: squalene epoxidase 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description Squalene epoxidase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02874        [VIEW IN KEGG]
KEGG_rclass RC00201        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00511        [VIEW IN KEGG]
EC 1.14.14.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00100        [VIEW IN KEGG]
ko00909        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00100        [VIEW IN KEGG]
map00909        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006694        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016125        [VIEW IN EMBL-EBI]
GO:0016126        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATCTCCGTCTTCTCTTTCTACGCACTTCTCGTGAAGCCGAGGCGGAACAGTAATAAAGTACTCGACCCTACAACTTCGAAGATCCATCACGATCGGACCGTTACCTCAACCGTCGGATCCCTGAATATTAACGGCGGAGATAACGTCAGCGACGTCATCGTTGTTGGAGCCGGAGTCGCTGGTTCTGCTCTGGCGTACACTCTTGGAAAGGATAATCGTAGAGTTCATGTGATCGAAAGAGATTTATCGGAGCCGGATCGTATTGTTGGAGAGCTTTTACAACCTGGTGGCTATCTCAAGTTACTCGAGTTGGGTATTGAAGATTGCGTGGAGGAAATAGATGCACAGAGAGTGTATGGCTATGCACTTTTCAAGGATGGGAAACGCATTCGCTTAGCTTACCCCTTGGAGAAGTTTCACACAGATGTATCTGGAAGGAGCTTTCACAATGGACGTTTTATTCAAAGAATGCGTGAGAAAGCTGCTTCACTTCCCAATGTTCAGTTAGAGCAAGGAACAGTTGTTTCTCTTCTAGAAGAGAATGGTACAATAAAAGGTGTGAGATATAAGAATAAAGCAGGAGAGGAATCAACGGCATTTGCAGCTTTGACTATAGTCTGTGACGGTTGTTTCTCAAACCTGCGTCGCTCTCTATGCAATCCTCAGGTCGATGTACCTTCTTGTTTTGTGGGCTTGGTCCTAGAGAACTGCAACCTCCCATTTGCAAACCATGGGCATGTCGTCTTAGCAGATCCATCACCAATCTTGATGTATCCAATCAGTAGCACAGAGGTCCGGTGTCTAGTCGACGTTCCTGGTCAGAAAGTGCCTTCTATCGCAAATGGTGAAATGGCAAACTATTTGAAAACTGTCGTGGCTCCTCAGATGCCTCATGAGGTCTTTGACTCTTTCATCGCTGCGGTTAACAAAGGAAACATCAAGTCCATGCCGAACAGAAGCATGCCGGCTTCTCCTTACCCAACTCCAGGAGCTTTGTTGATGGGAGACGCGTTCAACATGCGTCATCCGTTAACAGGTGGAGGCATGACGGTCGCGTTATCCGACATTGTTGTCCTGCGTAATCTCCTTAGACCGCTCCGTGACCTTAGCGACGGCTCCAGTCTCTGCAAATACCTCGAATCTTTCTACACTCTACGGAAGCCAGTGGCGTCAACGATCAACACCCTTGCGAATGCGCTTTACAAAGTGTTCTGTTCGTCGAAAGATGAAGCGAGAAACGAGATGAGGGAAGCTTGCTTCGATTATCTTGGCCTTGGTGGTATGTGCACGAGCGGACCAGTGTCTTTGCTTTCGGGTTTGAACCCTCGACCGTTGACTCTTGTCTGCCATTTCTTTGCCGTTGCGGTTTATGGAGTCATTCGGTTGTTGATCCCATTCCCTTCTCCAAAACGCATGTGGCTTGGAGCCAAATTAATCTCGGGAGCATCGGGGATAATATTTCCGATAATAAAGGCGGAAGGAGTAAGGCAGATGTTTTTCCCAGCGACTGTGCCTGCGTACTACAGAGCTCCTCCGGTTAAAGGAGAAACCAAATGTTCATAG
Protein:  
MEPQLLGWLSPPVISFALMISVFSFYALLVKPRRNSNKVLDPTTSKIHHDRTVTSTVGSLNINGGDNVSDVIVVGAGVAGSALAYTLGKDNRRVHVIERDLSEPDRIVGELLQPGGYLKLLELGIEDCVEEIDAQRVYGYALFKDGKRIRLAYPLEKFHTDVSGRSFHNGRFIQRMREKAASLPNVQLEQGTVVSLLEENGTIKGVRYKNKAGEESTAFAALTIVCDGCFSNLRRSLCNPQVDVPSCFVGLVLENCNLPFANHGHVVLADPSPILMYPISSTEVRCLVDVPGQKVPSIANGEMANYLKTVVAPQMPHEVFDSFIAAVNKGNIKSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLRDLSDGSSLCKYLESFYTLRKPVASTINTLANALYKVFCSSKDEARNEMREACFDYLGLGGMCTSGPVSLLSGLNPRPLTLVCHFFAVAVYGVIRLLIPFPSPKRMWLGAKLISGASGIIFPIIKAEGVRQMFFPATVPAYYRAPPVKGETKCS